Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn8aQ9WTU3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Gm5745-201ENSMUST00000183748 313 ntBASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Gm18307-201ENSMUST00000206864 949 ntBASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn8aQ9WTU3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm8598-201ENSMUST00000221184 836 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm5356-201ENSMUST00000093326 615 ntBASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn8aQ9WTU3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms