Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40aQ9R1C7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40aQ9R1C7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Prpf40aQ9R1C7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf40aQ9R1C7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.52■□□□□ 0.07
Prpf40aQ9R1C7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Gm15693-201ENSMUST00000120470 637 ntBASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf40aQ9R1C7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Gm13823-201ENSMUST00000119930 345 ntBASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Gm18766-201ENSMUST00000189811 808 ntBASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Gm29541-201ENSMUST00000191351 678 ntBASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf40aQ9R1C7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Gm6222-201ENSMUST00000120787 396 ntBASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Gm5779-201ENSMUST00000218467 910 ntBASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf40aQ9R1C7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf40aQ9R1C7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf40aQ9R1C7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf40aQ9R1C7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
Prpf40aQ9R1C7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms