Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trem1Q9JKE2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trem1Q9JKE2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trem1Q9JKE2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trem1Q9JKE2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trem1Q9JKE2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Celf4-206ENSMUST00000224553 1729 ntBASIC12.57□□□□□ -0.4
Trem1Q9JKE2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms