Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Zcchc17Q9ESX4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Gm8652-201ENSMUST00000181363 964 ntBASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.56■□□□□ 0.24
Zcchc17Q9ESX4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Gm29649-201ENSMUST00000185649 419 ntBASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc17Q9ESX4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Gm6091-201ENSMUST00000098307 165 ntBASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc17Q9ESX4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc17Q9ESX4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms