Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gm24513-201ENSMUST00000174964 138 ntBASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpne8Q9DC53 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Gm25287-201ENSMUST00000103846 110 ntBASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Gm22918-201ENSMUST00000103855 110 ntBASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Gm27397-201ENSMUST00000184997 107 ntBASIC14.66□□□□□ -0.06
Cpne8Q9DC53 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne8Q9DC53 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm22065-201ENSMUST00000103753 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm22066-201ENSMUST00000103761 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm24932-201ENSMUST00000103763 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm24115-201ENSMUST00000103799 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm22190-201ENSMUST00000103827 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm22191-201ENSMUST00000103831 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm24721-201ENSMUST00000103849 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm28018-201ENSMUST00000103869 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm26399-201ENSMUST00000103937 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm25349-201ENSMUST00000177728 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm23616-201ENSMUST00000177797 110 ntBASIC14.65□□□□□ -0.06
Cpne8Q9DC53 Gm25871-201ENSMUST00000177816 110 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms