Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Gm4804-201ENSMUST00000182234 999 ntBASIC18.49■□□□□ 0.55
U2af1Q9D883 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.49■□□□□ 0.55
U2af1Q9D883 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.49■□□□□ 0.55
U2af1Q9D883 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.49■□□□□ 0.55
U2af1Q9D883 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
U2af1Q9D883 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2af1Q9D883 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
U2af1Q9D883 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.48■□□□□ 0.55
U2af1Q9D883 Gm28760-201ENSMUST00000185995 736 ntBASIC18.48■□□□□ 0.55
U2af1Q9D883 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
U2af1Q9D883 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
U2af1Q9D883 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.48■□□□□ 0.55
U2af1Q9D883 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
U2af1Q9D883 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
U2af1Q9D883 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.48■□□□□ 0.55
U2af1Q9D883 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
U2af1Q9D883 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
U2af1Q9D883 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.47■□□□□ 0.55
U2af1Q9D883 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Gm12859-201ENSMUST00000117834 427 ntBASIC18.47■□□□□ 0.55
U2af1Q9D883 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
U2af1Q9D883 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.47■□□□□ 0.55
U2af1Q9D883 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
U2af1Q9D883 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
U2af1Q9D883 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
U2af1Q9D883 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.46■□□□□ 0.55
U2af1Q9D883 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.46■□□□□ 0.55
U2af1Q9D883 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.46■□□□□ 0.55
U2af1Q9D883 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.46■□□□□ 0.55
U2af1Q9D883 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
U2af1Q9D883 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms