Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Gm9519-201ENSMUST00000206108 1337 ntBASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bl1Q9D701 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3bl1Q9D701 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3bl1Q9D701 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Upk3bl1Q9D701 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3bl1Q9D701 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.83□□□□□ -0.36
Upk3bl1Q9D701 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Gm23634-201ENSMUST00000175071 91 ntBASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bl1Q9D701 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bl1Q9D701 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms