Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm15824-201ENSMUST00000119516 955 ntBASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm13385-201ENSMUST00000121089 220 ntBASIC16.72■□□□□ 0.27
Stag1Q9D3E6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm8927-201ENSMUST00000181978 981 ntBASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Gm3222-201ENSMUST00000071282 990 ntBASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.72■□□□□ 0.27
Stag1Q9D3E6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Gm43094-201ENSMUST00000196549 921 ntBASIC16.71■□□□□ 0.27
Stag1Q9D3E6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Stag1Q9D3E6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Stag1Q9D3E6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Stag1Q9D3E6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Stag1Q9D3E6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
Stag1Q9D3E6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Stag1Q9D3E6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Stag1Q9D3E6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Stag1Q9D3E6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Stag1Q9D3E6 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Gm44719-201ENSMUST00000206404 149 ntBASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Stag1Q9D3E6 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.69■□□□□ 0.26
Stag1Q9D3E6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms