Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d3Q9CSV6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d3Q9CSV6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Gm13464-201ENSMUST00000119418 935 ntBASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Gm45098-201ENSMUST00000207179 657 ntBASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d3Q9CSV6 Acot6-202ENSMUST00000222921 3622 ntBASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.01□□□□□ -0.49
Sft2d3Q9CSV6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms