Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RTRAFQ9CQE8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Gm27867-201ENSMUST00000184778 125 ntBASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RTRAFQ9CQE8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Gm25925-201ENSMUST00000158314 306 ntBASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms