Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gm15173-201ENSMUST00000122049 433 ntBASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gm16026-204ENSMUST00000162652 683 ntBASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gm37230-201ENSMUST00000194491 818 ntBASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gm43347-201ENSMUST00000200226 580 ntBASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Krt88Q9CPR6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Gm25925-201ENSMUST00000158314 306 ntBASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Birc2-201ENSMUST00000054878 378 ntBASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt88Q9CPR6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt88Q9CPR6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms