Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.21■□□□□ 0.51
Rtn4Q99P72 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.21■□□□□ 0.51
Rtn4Q99P72 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Gm37160-201ENSMUST00000193081 1689 ntBASIC18.21■□□□□ 0.51
Rtn4Q99P72 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4Q99P72 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rtn4Q99P72 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rtn4Q99P72 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Gm28064-201ENSMUST00000185639 858 ntBASIC18.2■□□□□ 0.5
Rtn4Q99P72 Gm29541-201ENSMUST00000191351 678 ntBASIC18.2■□□□□ 0.5
Rtn4Q99P72 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Gm22005-201ENSMUST00000082795 141 ntBASIC18.2■□□□□ 0.5
Rtn4Q99P72 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4Q99P72 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Gm37638-201ENSMUST00000194337 1123 ntBASIC18.19■□□□□ 0.5
Rtn4Q99P72 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtn4Q99P72 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rtn4Q99P72 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Gm42449-201ENSMUST00000200349 2258 ntBASIC18.19■□□□□ 0.5
Rtn4Q99P72 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4Q99P72 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Gm13505-201ENSMUST00000121666 817 ntBASIC18.18■□□□□ 0.5
Rtn4Q99P72 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms