Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.74□□□□□ -0.21
Msh4Q99MT2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.73□□□□□ -0.21
Msh4Q99MT2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Olfr286-202ENSMUST00000205305 969 ntBASIC13.73□□□□□ -0.21
Msh4Q99MT2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.73□□□□□ -0.21
Msh4Q99MT2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.73□□□□□ -0.21
Msh4Q99MT2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Msh4Q99MT2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Msh4Q99MT2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.72□□□□□ -0.21
Msh4Q99MT2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Gm9182-201ENSMUST00000217829 639 ntBASIC13.72□□□□□ -0.21
Msh4Q99MT2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.72□□□□□ -0.21
Msh4Q99MT2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms