Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Gm18827-201ENSMUST00000188341 790 ntBASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Gm13689-201ENSMUST00000119360 685 ntBASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Gm37714-201ENSMUST00000194742 342 ntBASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Gm6013-201ENSMUST00000212264 699 ntBASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-1Q99MA9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm23931-201ENSMUST00000103842 109 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm15376-201ENSMUST00000122258 783 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm27243-201ENSMUST00000183964 521 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm43818-201ENSMUST00000200605 466 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Gm45880-201ENSMUST00000213041 853 ntBASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx6-1Q99MA9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Nkx6-1Q99MA9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkx6-1Q99MA9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkx6-1Q99MA9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms