Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lims1Q99JW4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lims1Q99JW4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lims1Q99JW4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
Lims1Q99JW4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lims1Q99JW4 BC001981-202ENSMUST00000191393 1545 ntBASIC12.83□□□□□ -0.35
Lims1Q99JW4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.83□□□□□ -0.36
Lims1Q99JW4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Mir3113-201ENSMUST00000175478 76 ntBASIC12.83□□□□□ -0.36
Lims1Q99JW4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.83□□□□□ -0.36
Lims1Q99JW4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.83□□□□□ -0.36
Lims1Q99JW4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.83□□□□□ -0.36
Lims1Q99JW4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lims1Q99JW4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.82□□□□□ -0.36
Lims1Q99JW4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Gm12260-201ENSMUST00000122447 411 ntBASIC12.82□□□□□ -0.36
Lims1Q99JW4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Gm11025-201ENSMUST00000140773 466 ntBASIC12.82□□□□□ -0.36
Lims1Q99JW4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.82□□□□□ -0.36
Lims1Q99JW4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.82□□□□□ -0.36
Lims1Q99JW4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.82□□□□□ -0.36
Lims1Q99JW4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lims1Q99JW4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Gm2810-201ENSMUST00000118681 990 ntBASIC12.81□□□□□ -0.36
Lims1Q99JW4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms