Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm27847-201ENSMUST00000183711 107 ntBASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm27375-201ENSMUST00000183799 107 ntBASIC16.17■□□□□ 0.18
Rfc4Q99J62 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.17■□□□□ 0.18
Rfc4Q99J62 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm10478-201ENSMUST00000084451 396 ntBASIC16.17■□□□□ 0.18
Rfc4Q99J62 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfc4Q99J62 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.16■□□□□ 0.18
Rfc4Q99J62 Gm42693-201ENSMUST00000196779 631 ntBASIC16.16■□□□□ 0.18
Rfc4Q99J62 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.16■□□□□ 0.18
Rfc4Q99J62 Gm7561-201ENSMUST00000211203 886 ntBASIC16.16■□□□□ 0.18
Rfc4Q99J62 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.16■□□□□ 0.18
Rfc4Q99J62 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc4Q99J62 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Gm14660-201ENSMUST00000119809 575 ntBASIC16.15■□□□□ 0.18
Rfc4Q99J62 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Gm27731-201ENSMUST00000185192 107 ntBASIC16.15■□□□□ 0.18
Rfc4Q99J62 Gm37424-201ENSMUST00000191727 561 ntBASIC16.15■□□□□ 0.18
Rfc4Q99J62 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.15■□□□□ 0.18
Rfc4Q99J62 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rfc4Q99J62 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rfc4Q99J62 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.14■□□□□ 0.17
Rfc4Q99J62 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Gm6091-201ENSMUST00000098307 165 ntBASIC16.14■□□□□ 0.17
Rfc4Q99J62 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rfc4Q99J62 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms