Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Gm4804-201ENSMUST00000182234 999 ntBASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdha9Q91Y11 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdha9Q91Y11 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdha9Q91Y11 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdha9Q91Y11 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdha9Q91Y11 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdha9Q91Y11 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Gm4875-201ENSMUST00000118257 786 ntBASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Mir8102-201ENSMUST00000184148 139 ntBASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha9Q91Y11 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Mir7684-201ENSMUST00000183858 60 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms