Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Gm5566-201ENSMUST00000116118 459 ntBASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Gm24158-201ENSMUST00000175263 71 ntBASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb13Q91Y06 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb13Q91Y06 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdhb13Q91Y06 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb13Q91Y06 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb13Q91Y06 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb13Q91Y06 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb13Q91Y06 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhb13Q91Y06 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb13Q91Y06 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb13Q91Y06 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Gm9719-201ENSMUST00000162765 543 ntBASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb13Q91Y06 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb13Q91Y06 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms