Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Gm20949-201ENSMUST00000206478 952 ntBASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb22Q91XZ8 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb22Q91XZ8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Gm15487-201ENSMUST00000122373 465 ntBASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Gm27838-201ENSMUST00000184829 128 ntBASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms