Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb5Q91XZ5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb5Q91XZ5 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.54■□□□□ 0.24
Pcdhb5Q91XZ5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.54■□□□□ 0.24
Pcdhb5Q91XZ5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb5Q91XZ5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb5Q91XZ5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Gm12928-201ENSMUST00000117115 573 ntBASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Mir1982-201ENSMUST00000157368 74 ntBASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 AY702102-202ENSMUST00000194651 1173 ntBASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Gm8463-201ENSMUST00000208573 613 ntBASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb5Q91XZ5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Gm12390-201ENSMUST00000117897 397 ntBASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Gm27486-201ENSMUST00000184923 80 ntBASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Gm9899-201ENSMUST00000065519 555 ntBASIC16.52■□□□□ 0.24
Pcdhb5Q91XZ5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb5Q91XZ5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Gm13689-201ENSMUST00000119360 685 ntBASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Gm12485-201ENSMUST00000119641 291 ntBASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb5Q91XZ5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb5Q91XZ5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms