Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Gm7488-201ENSMUST00000117148 684 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Gm15321-201ENSMUST00000121290 288 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Gm44855-201ENSMUST00000205725 362 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Gm45453-201ENSMUST00000211758 853 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Gm46209-201ENSMUST00000217912 553 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx41Q91VN6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Gm43703-201ENSMUST00000200523 763 ntBASIC16.16■□□□□ 0.18
Ddx41Q91VN6 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Carlr-201ENSMUST00000181515 2574 ntBASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx41Q91VN6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Gm5745-201ENSMUST00000183748 313 ntBASIC16.15■□□□□ 0.18
Ddx41Q91VN6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Syt7-205ENSMUST00000224135 1557 ntBASIC16.15■□□□□ 0.18
Ddx41Q91VN6 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.15■□□□□ 0.18
Ddx41Q91VN6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx41Q91VN6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms