Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Gm44760-201ENSMUST00000206375 1173 ntBASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Gm19269-201ENSMUST00000211401 804 ntBASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb17Q91VD8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 AC154186.1-201ENSMUST00000227711 1597 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Gm20778-201ENSMUST00000178524 627 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Mir6956-201ENSMUST00000183598 62 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Gm27631-201ENSMUST00000184163 466 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Gm37860-201ENSMUST00000195380 1034 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Gm45453-201ENSMUST00000211758 853 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 AC153801.1-201ENSMUST00000217904 947 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Gm17611-202ENSMUST00000220613 814 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 BC001981-202ENSMUST00000191393 1545 ntBASIC14.87□□□□□ -0.03
Pcdhb17Q91VD8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Gm6461-201ENSMUST00000120015 633 ntBASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Gm12882-201ENSMUST00000121696 517 ntBASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Gm22693-201ENSMUST00000175049 442 ntBASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Gm25144-201ENSMUST00000179561 110 ntBASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Gm25352-201ENSMUST00000179815 110 ntBASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 AC174797.4-201ENSMUST00000225510 347 ntBASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 AC242269.1-201ENSMUST00000227020 741 ntBASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb17Q91VD8 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Pcdhb17Q91VD8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb17Q91VD8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms