Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh18Q8VHR0 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Mir5126-201ENSMUST00000175513 77 ntBASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh18Q8VHR0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms