Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4aQ8VEJ9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4aQ8VEJ9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm22065-201ENSMUST00000103753 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm22066-201ENSMUST00000103761 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm24932-201ENSMUST00000103763 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm24115-201ENSMUST00000103799 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm22190-201ENSMUST00000103827 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm22191-201ENSMUST00000103831 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm24721-201ENSMUST00000103849 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm28018-201ENSMUST00000103869 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm26399-201ENSMUST00000103937 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm14127-201ENSMUST00000117906 678 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm25349-201ENSMUST00000177728 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm23616-201ENSMUST00000177797 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm25871-201ENSMUST00000177816 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm24752-201ENSMUST00000178240 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm24496-201ENSMUST00000178287 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm25649-201ENSMUST00000178476 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm25548-201ENSMUST00000178681 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm23147-201ENSMUST00000178841 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm26095-201ENSMUST00000179270 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm22171-201ENSMUST00000179283 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm23936-201ENSMUST00000179354 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm22619-201ENSMUST00000179516 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm25255-201ENSMUST00000179579 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm24755-201ENSMUST00000179691 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm26506-201ENSMUST00000179692 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm25086-201ENSMUST00000179931 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm23243-201ENSMUST00000180047 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm24659-201ENSMUST00000180212 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm24169-201ENSMUST00000180244 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm23689-201ENSMUST00000180354 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm27359-201ENSMUST00000184153 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm27785-201ENSMUST00000184268 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm27466-201ENSMUST00000184396 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm27703-201ENSMUST00000184836 110 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4aQ8VEJ9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms