Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Gm11814-201ENSMUST00000119515 929 ntBASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp7Q8R1T1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Gm12742-201ENSMUST00000117326 410 ntBASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Gm13689-201ENSMUST00000119360 685 ntBASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
Chmp7Q8R1T1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp7Q8R1T1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm15371-201ENSMUST00000117057 784 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms