Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Gm27533-201ENSMUST00000183800 152 ntBASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Gm18027-201ENSMUST00000218947 619 ntBASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Shd-206ENSMUST00000225145 998 ntBASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf7Q8R0S1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Mir1897-201ENSMUST00000122581 272 ntBASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Gm25144-201ENSMUST00000179561 110 ntBASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Gm25352-201ENSMUST00000179815 110 ntBASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf7Q8R0S1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Gm15653-201ENSMUST00000119247 907 ntBASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Gm37714-201ENSMUST00000194742 342 ntBASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf7Q8R0S1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms