Protein–RNA interactions for Protein: Q8NHQ9
Retrieved 4 of 15,504 protein–RNA pairs in 36.8 ms
DDX55, ATP-dependent RNA helicase DDX55, human
Known RBP eCLIP
Length 600 aa.
Protein | RNA | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Gene | UniProt Accession | Transcript Symbol | Ensembl Transcript ID | Length | Transcript Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
DDX55 | Q8NHQ9 | SESTD1-206 | ENST00000446758 | 1699 nt | TSL 2 | 5.62 | □□□□□ -1.51 | 2e-6 | ■□□□□ 8 |
DDX55 | Q8NHQ9 | WDR59-215 | ENST00000568462 | 550 nt | TSL 4 | 5.51 | □□□□□ -1.53 | 2e-6 | ■□□□□ 8 |
DDX55 | Q8NHQ9 | SESTD1-201 | ENST00000335289 | 1675 nt | TSL 5 | 4.29 | □□□□□ -1.72 | 2e-6 | ■□□□□ 8 |
DDX55 | Q8NHQ9 | FBXO11-201 | ENST00000402508 | 3844 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | 9e-12 | ■□□□□ 8 |