Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.41□□□□□ -0.1
CopaQ8CIE6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.4□□□□□ -0.1
CopaQ8CIE6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.4□□□□□ -0.1
CopaQ8CIE6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Gm27989-201ENSMUST00000184721 107 ntBASIC14.4□□□□□ -0.1
CopaQ8CIE6 Mir6977-201ENSMUST00000184960 64 ntBASIC14.4□□□□□ -0.1
CopaQ8CIE6 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.4□□□□□ -0.1
CopaQ8CIE6 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.4□□□□□ -0.1
CopaQ8CIE6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopaQ8CIE6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.39□□□□□ -0.11
CopaQ8CIE6 Gm13823-201ENSMUST00000119930 345 ntBASIC14.39□□□□□ -0.11
CopaQ8CIE6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.39□□□□□ -0.11
CopaQ8CIE6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopaQ8CIE6 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.39□□□□□ -0.11
CopaQ8CIE6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.38□□□□□ -0.11
CopaQ8CIE6 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.38□□□□□ -0.11
CopaQ8CIE6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Mir8102-201ENSMUST00000184148 139 ntBASIC14.38□□□□□ -0.11
CopaQ8CIE6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.38□□□□□ -0.11
CopaQ8CIE6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms