Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rdh1Q8CGV4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Gm15240-201ENSMUST00000118156 720 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Gm13385-201ENSMUST00000121089 220 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Gm12134-201ENSMUST00000122109 520 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Gm8584-201ENSMUST00000171982 758 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Gm5279-201ENSMUST00000199575 745 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Gm9908-201ENSMUST00000211534 448 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rdh1Q8CGV4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Rdh1Q8CGV4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Gm6912-201ENSMUST00000117218 544 ntBASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Gm18905-201ENSMUST00000205454 928 ntBASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Mir497b-201ENSMUST00000093601 125 ntBASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rdh1Q8CGV4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rdh1Q8CGV4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms