Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Gm14928-201ENSMUST00000120198 477 ntBASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rbm28Q8CGC6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Gm12490-201ENSMUST00000120255 560 ntBASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Gm28631-201ENSMUST00000190740 334 ntBASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Gm9797-201ENSMUST00000052902 613 ntBASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbm28Q8CGC6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Gm12585-201ENSMUST00000117307 290 ntBASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Gm15460-201ENSMUST00000118147 391 ntBASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Gm15393-201ENSMUST00000120499 219 ntBASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Gm28760-201ENSMUST00000185995 736 ntBASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rbm28Q8CGC6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms