Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.55□□□□□ -0.4
ShfQ8CG80 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
ShfQ8CG80 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ShfQ8CG80 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.55□□□□□ -0.4
ShfQ8CG80 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.55□□□□□ -0.4
ShfQ8CG80 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ShfQ8CG80 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.55□□□□□ -0.4
ShfQ8CG80 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShfQ8CG80 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.54□□□□□ -0.4
ShfQ8CG80 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Gm38225-201ENSMUST00000194001 393 ntBASIC12.54□□□□□ -0.4
ShfQ8CG80 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.54□□□□□ -0.4
ShfQ8CG80 Gm18041-201ENSMUST00000218210 618 ntBASIC12.54□□□□□ -0.4
ShfQ8CG80 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.54□□□□□ -0.4
ShfQ8CG80 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ShfQ8CG80 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ShfQ8CG80 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.53□□□□□ -0.4
ShfQ8CG80 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ShfQ8CG80 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.53□□□□□ -0.4
ShfQ8CG80 AA543401-201ENSMUST00000164248 1269 ntBASIC12.53□□□□□ -0.4
ShfQ8CG80 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.53□□□□□ -0.4
ShfQ8CG80 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms