Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.72□□□□□ -0.21
Rab43Q8CG50 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab43Q8CG50 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Mir7085-201ENSMUST00000184353 66 ntBASIC13.71□□□□□ -0.21
Rab43Q8CG50 Gm27892-201ENSMUST00000185017 106 ntBASIC13.71□□□□□ -0.21
Rab43Q8CG50 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.71□□□□□ -0.21
Rab43Q8CG50 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab43Q8CG50 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.71□□□□□ -0.22
Rab43Q8CG50 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab43Q8CG50 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.71□□□□□ -0.22
Rab43Q8CG50 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rab43Q8CG50 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab43Q8CG50 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Rab43Q8CG50 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab43Q8CG50 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab43Q8CG50 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rab43Q8CG50 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.7□□□□□ -0.22
Rab43Q8CG50 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Gm15240-201ENSMUST00000118156 720 ntBASIC13.7□□□□□ -0.22
Rab43Q8CG50 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Gm17794-201ENSMUST00000220252 955 ntBASIC13.7□□□□□ -0.22
Rab43Q8CG50 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rab43Q8CG50 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.7□□□□□ -0.22
Rab43Q8CG50 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab43Q8CG50 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.69□□□□□ -0.22
Rab43Q8CG50 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.69□□□□□ -0.22
Rab43Q8CG50 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.69□□□□□ -0.22
Rab43Q8CG50 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab43Q8CG50 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms