Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc28bQ8CEG5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc28bQ8CEG5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc28bQ8CEG5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc28bQ8CEG5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc28bQ8CEG5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc28bQ8CEG5 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.94□□□□□ -0.18
Ccdc28bQ8CEG5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc28bQ8CEG5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Gm16026-204ENSMUST00000162652 683 ntBASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Gm37230-201ENSMUST00000194491 818 ntBASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Gm6376-201ENSMUST00000209407 580 ntBASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.93□□□□□ -0.18
Ccdc28bQ8CEG5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Gm15173-201ENSMUST00000122049 433 ntBASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Gm45747-201ENSMUST00000212203 999 ntBASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc28bQ8CEG5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Gm43347-201ENSMUST00000200226 580 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms