Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam228aQ8CDW1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Fam228aQ8CDW1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam228aQ8CDW1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam228aQ8CDW1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Gm15483-201ENSMUST00000120338 456 ntBASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Mir5126-201ENSMUST00000175513 77 ntBASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam228aQ8CDW1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.77□□□□□ -0.04
Fam228aQ8CDW1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Fam228aQ8CDW1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Gm9385-201ENSMUST00000117563 472 ntBASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Gm13884-201ENSMUST00000118103 829 ntBASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Mir5131-201ENSMUST00000175426 93 ntBASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms