Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Grk6-205ENSMUST00000224653 2976 ntBASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcpip1Q8CDG3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gm13616-201ENSMUST00000120600 222 ntBASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gm12882-201ENSMUST00000121696 517 ntBASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Rprl2-201ENSMUST00000157150 290 ntBASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms