Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lysmd4Q8CC84 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Gm15483-201ENSMUST00000120338 456 ntBASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Gm5177-201ENSMUST00000183092 997 ntBASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Gm27301-201ENSMUST00000184012 127 ntBASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lysmd4Q8CC84 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Mir5126-201ENSMUST00000175513 77 ntBASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Gm2445-201ENSMUST00000182798 989 ntBASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms