Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Gm4875-201ENSMUST00000118257 786 ntBASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc60Q8C4J0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc60Q8C4J0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc60Q8C4J0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc60Q8C4J0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.94■□□□□ 0.46
Ccdc60Q8C4J0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Gm15487-201ENSMUST00000122373 465 ntBASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Gm10576-201ENSMUST00000191927 825 ntBASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms