Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Gm20949-201ENSMUST00000206478 952 ntBASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp44Q8C2S0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.43■□□□□ 0.22
Usp44Q8C2S0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Gm8927-201ENSMUST00000181978 981 ntBASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Mir7684-201ENSMUST00000183858 60 ntBASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Gm29667-201ENSMUST00000190817 490 ntBASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Gm3222-201ENSMUST00000071282 990 ntBASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp44Q8C2S0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Mir698-201ENSMUST00000102164 109 ntBASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Gm13385-201ENSMUST00000121089 220 ntBASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Mir8102-201ENSMUST00000184148 139 ntBASIC16.42■□□□□ 0.22
Usp44Q8C2S0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.42■□□□□ 0.22
Usp44Q8C2S0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.42■□□□□ 0.22
Usp44Q8C2S0 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms