Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Gm15590-201ENSMUST00000078419 552 ntBASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tsen54Q8C2A2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Gm18489-201ENSMUST00000172565 551 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Gm5682-201ENSMUST00000173402 505 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Gm43767-201ENSMUST00000198933 381 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Gm6443-201ENSMUST00000203599 874 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tsen54Q8C2A2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Gm7787-201ENSMUST00000216858 688 ntBASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms