Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trub1Q8C0D0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Mir1897-201ENSMUST00000122581 272 ntBASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Gm27533-201ENSMUST00000183800 152 ntBASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Gm18027-201ENSMUST00000218947 619 ntBASIC14.52□□□□□ -0.09
Trub1Q8C0D0 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Shd-206ENSMUST00000225145 998 ntBASIC14.52□□□□□ -0.09
Trub1Q8C0D0 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trub1Q8C0D0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trub1Q8C0D0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trub1Q8C0D0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms