Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Gm13385-201ENSMUST00000121089 220 ntBASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf2Q8BZT2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm15678-201ENSMUST00000117573 960 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm8927-201ENSMUST00000181978 981 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Mir7654-201ENSMUST00000185082 70 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm43433-201ENSMUST00000196573 481 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm18307-201ENSMUST00000206864 949 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm3222-201ENSMUST00000071282 990 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms