Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC19.78■□□□□ 0.76
Usp47Q8BY87 AC154687.2-201ENSMUST00000223853 640 ntBASIC19.78■□□□□ 0.76
Usp47Q8BY87 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp47Q8BY87 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp47Q8BY87 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp47Q8BY87 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
Usp47Q8BY87 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp47Q8BY87 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp47Q8BY87 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp47Q8BY87 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC19.77■□□□□ 0.75
Usp47Q8BY87 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.76■□□□□ 0.75
Usp47Q8BY87 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.76■□□□□ 0.75
Usp47Q8BY87 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC19.76■□□□□ 0.75
Usp47Q8BY87 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC19.76■□□□□ 0.75
Usp47Q8BY87 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Gm15889-202ENSMUST00000212669 2443 ntBASIC19.76■□□□□ 0.75
Usp47Q8BY87 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp47Q8BY87 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 AC167013.2-201ENSMUST00000228520 2684 ntBASIC19.75■□□□□ 0.75
Usp47Q8BY87 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Usp47Q8BY87 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Gm21038-201ENSMUST00000222205 1383 ntBASIC19.74■□□□□ 0.75
Usp47Q8BY87 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Gm14730-201ENSMUST00000122378 1045 ntBASIC19.74■□□□□ 0.75
Usp47Q8BY87 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Gm7498-201ENSMUST00000203282 1084 ntBASIC19.74■□□□□ 0.75
Usp47Q8BY87 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Gm8337-201ENSMUST00000187358 1938 ntBASIC19.74■□□□□ 0.75
Usp47Q8BY87 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC19.74■□□□□ 0.75
Usp47Q8BY87 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp47Q8BY87 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Usp47Q8BY87 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms