Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm13015-201ENSMUST00000118674 204 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm5479-201ENSMUST00000160578 435 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Mir6956-201ENSMUST00000183598 62 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm7774-201ENSMUST00000200064 533 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4Q8BQZ5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Gm14042-201ENSMUST00000120139 833 ntBASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Gm18737-201ENSMUST00000173594 937 ntBASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Gm24158-201ENSMUST00000175263 71 ntBASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4Q8BQZ5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Gm29541-201ENSMUST00000191351 678 ntBASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Gm10253-201ENSMUST00000194270 940 ntBASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Gm9182-201ENSMUST00000217829 639 ntBASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms