Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Gm2810-201ENSMUST00000118681 990 ntBASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Rprl2-201ENSMUST00000157150 290 ntBASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Mir1895-201ENSMUST00000122615 79 ntBASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Gm25911-201ENSMUST00000157621 56 ntBASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Gm27494-201ENSMUST00000184735 189 ntBASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc40Q8BI79 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Gm10275-202ENSMUST00000168697 495 ntBASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Gm10275-201ENSMUST00000092620 635 ntBASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.71□□□□□ -0.05
Ccdc40Q8BI79 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc40Q8BI79 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Gm11745-201ENSMUST00000121669 448 ntBASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Ccdc40Q8BI79 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms