Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf38Q8BI21 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Gm6973-201ENSMUST00000117080 721 ntBASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf38Q8BI21 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf38Q8BI21 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf38Q8BI21 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rnf38Q8BI21 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rnf38Q8BI21 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf38Q8BI21 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms