Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Carlr-201ENSMUST00000181515 2574 ntBASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Efs-202ENSMUST00000227037 2540 ntBASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.72■□□□□ 0.11
Trnp1Q80ZI1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Gm13369-201ENSMUST00000119442 987 ntBASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Gm25927-201ENSMUST00000175058 117 ntBASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.71■□□□□ 0.11
Trnp1Q80ZI1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.71■□□□□ 0.1
Trnp1Q80ZI1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trnp1Q80ZI1 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.71■□□□□ 0.1
Trnp1Q80ZI1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trnp1Q80ZI1 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.71■□□□□ 0.1
Trnp1Q80ZI1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Mir686-201ENSMUST00000102174 109 ntBASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Gm22323-201ENSMUST00000103832 109 ntBASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Gm25261-201ENSMUST00000157416 134 ntBASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Gm29396-201ENSMUST00000185659 716 ntBASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Gm6334-201ENSMUST00000207083 228 ntBASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trnp1Q80ZI1 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms