Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.84■□□□□ 0.45
Shank2Q80Z38 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.84■□□□□ 0.45
Shank2Q80Z38 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.84■□□□□ 0.45
Shank2Q80Z38 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 B9d1os-201ENSMUST00000137010 674 ntBASIC17.84■□□□□ 0.45
Shank2Q80Z38 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.84■□□□□ 0.45
Shank2Q80Z38 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.84■□□□□ 0.45
Shank2Q80Z38 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank2Q80Z38 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank2Q80Z38 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank2Q80Z38 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank2Q80Z38 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank2Q80Z38 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank2Q80Z38 Gm9333-201ENSMUST00000205452 1323 ntBASIC17.83■□□□□ 0.45
Shank2Q80Z38 Gm11439-201ENSMUST00000118598 409 ntBASIC17.83■□□□□ 0.45
Shank2Q80Z38 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.83■□□□□ 0.45
Shank2Q80Z38 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.83■□□□□ 0.45
Shank2Q80Z38 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.83■□□□□ 0.45
Shank2Q80Z38 Gm17330-201ENSMUST00000221047 165 ntBASIC17.83■□□□□ 0.45
Shank2Q80Z38 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank2Q80Z38 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Shank2Q80Z38 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.83■□□□□ 0.45
Shank2Q80Z38 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank2Q80Z38 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Mir5120-201ENSMUST00000175020 78 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm24830-201ENSMUST00000102024 166 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm11222-201ENSMUST00000119005 738 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm12403-201ENSMUST00000121384 959 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm25890-201ENSMUST00000177643 165 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Rnu1b2-201ENSMUST00000178073 165 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Rnu1b1-201ENSMUST00000178250 165 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm22614-201ENSMUST00000178300 165 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Mospd4-201ENSMUST00000180618 576 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm22042-201ENSMUST00000082989 165 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm26232-201ENSMUST00000083360 166 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Gm24136-201ENSMUST00000083374 165 ntBASIC17.82■□□□□ 0.44
Shank2Q80Z38 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms