Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm4804-201ENSMUST00000182234 999 ntBASIC13.45□□□□□ -0.26
Vrk1Q80X41 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.45□□□□□ -0.26
Vrk1Q80X41 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.45□□□□□ -0.26
Vrk1Q80X41 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vrk1Q80X41 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.44□□□□□ -0.26
Vrk1Q80X41 Gm13829-201ENSMUST00000119600 138 ntBASIC13.44□□□□□ -0.26
Vrk1Q80X41 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Gm9002-201ENSMUST00000178437 499 ntBASIC13.44□□□□□ -0.26
Vrk1Q80X41 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.44□□□□□ -0.26
Vrk1Q80X41 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vrk1Q80X41 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Gm15824-201ENSMUST00000119516 955 ntBASIC13.43□□□□□ -0.26
Vrk1Q80X41 Gm12341-201ENSMUST00000119724 503 ntBASIC13.43□□□□□ -0.26
Vrk1Q80X41 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.43□□□□□ -0.26
Vrk1Q80X41 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Gm18062-201ENSMUST00000208020 547 ntBASIC13.43□□□□□ -0.26
Vrk1Q80X41 Gm18055-201ENSMUST00000208254 547 ntBASIC13.43□□□□□ -0.26
Vrk1Q80X41 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vrk1Q80X41 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Gm27701-201ENSMUST00000184498 110 ntBASIC13.42□□□□□ -0.26
Vrk1Q80X41 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Gm5279-201ENSMUST00000199575 745 ntBASIC13.42□□□□□ -0.26
Vrk1Q80X41 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Gm17795-201ENSMUST00000214505 757 ntBASIC13.42□□□□□ -0.26
Vrk1Q80X41 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vrk1Q80X41 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms