Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.53□□□□□ -0.24
Otop1Q80VM9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Gm6244-201ENSMUST00000178732 841 ntBASIC13.53□□□□□ -0.24
Otop1Q80VM9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.53□□□□□ -0.24
Otop1Q80VM9 Gm5279-201ENSMUST00000199575 745 ntBASIC13.53□□□□□ -0.24
Otop1Q80VM9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.53□□□□□ -0.24
Otop1Q80VM9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otop1Q80VM9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otop1Q80VM9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Mir1894-201ENSMUST00000122802 81 ntBASIC13.52□□□□□ -0.25
Otop1Q80VM9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Gm17794-201ENSMUST00000220252 955 ntBASIC13.52□□□□□ -0.25
Otop1Q80VM9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Otop1Q80VM9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.51□□□□□ -0.25
Otop1Q80VM9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.51□□□□□ -0.25
Otop1Q80VM9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.51□□□□□ -0.25
Otop1Q80VM9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Otop1Q80VM9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms