Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.15□□□□□ -0.14
Usp8Q80U87 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp8Q80U87 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp8Q80U87 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp8Q80U87 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Usp8Q80U87 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp8Q80U87 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Usp8Q80U87 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Usp8Q80U87 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.14□□□□□ -0.15
Usp8Q80U87 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp8Q80U87 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Usp8Q80U87 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Gm20553-201ENSMUST00000204205 844 ntBASIC14.14□□□□□ -0.15
Usp8Q80U87 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp8Q80U87 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Usp8Q80U87 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp8Q80U87 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Usp8Q80U87 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp8Q80U87 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp8Q80U87 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.13□□□□□ -0.15
Usp8Q80U87 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Gm27920-201ENSMUST00000183953 96 ntBASIC14.13□□□□□ -0.15
Usp8Q80U87 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.13□□□□□ -0.15
Usp8Q80U87 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Usp8Q80U87 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp8Q80U87 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.12□□□□□ -0.15
Usp8Q80U87 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.12□□□□□ -0.15
Usp8Q80U87 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms